HL_7RYG_004

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

UUUAAG

Length

6 nucleotides

Bulged bases

7RYG|1|A|U|146

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYG_004 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.2802

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7RYG|1|A|U|144
7RYG|1|A|U|145
7RYG|1|A|U|146
7RYG|1|A|A|147
7RYG|1|A|A|148
7RYG|1|A|G|149

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain S

50S ribosomal protein L23