HL_7RYG_033

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

7RYG|1|A|U|1391, 7RYG|1|A|U|1392

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYG_033 not in the Motif Atlas

Homologous match to HL_5J7L_168

Geometric discrepancy: 0.1163

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7RYG|1|A|G|1384
7RYG|1|A|U|1385
7RYG|1|A|U|1386
7RYG|1|A|A|1387
7RYG|1|A|A|1388
7RYG|1|A|U|1389
7RYG|1|A|A|1390
7RYG|1|A|U|1391
7RYG|1|A|U|1392
7RYG|1|A|C|1393

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain S

50S ribosomal protein L23