HL_7RYG_064

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CGAGACUAG

Length

9 nucleotides

Bulged bases

7RYG|1|A|G|2816

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYG_064 not in the Motif Atlas

Homologous match to HL_7RQB_068

Geometric discrepancy: 0.1112

The information below is about HL_7RQB_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7RYG|1|A|C|2815
7RYG|1|A|G|2816
7RYG|1|A|A|2817
7RYG|1|A|G|2818
7RYG|1|A|A|2819
7RYG|1|A|C|2820
7RYG|1|A|U|2821
7RYG|1|A|A|2822
7RYG|1|A|G|2823

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain M

50S ribosomal protein L17

Chain O

50S ribosomal protein L19