HL_7RYG_078

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

7RYG|1|a|U|417, 7RYG|1|a|A|418

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYG_078 not in the Motif Atlas

Geometric match to HL_8P9A_231

Geometric discrepancy: 0.39

The information below is about HL_8P9A_231

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32682.1

Basepair signature

cWW-F-F

Number of instances in this motif group

3

Unit IDs

7RYG|1|a|C|415
7RYG|1|a|U|416
7RYG|1|a|U|417
7RYG|1|a|A|418
7RYG|1|a|U|419
7RYG|1|a|G|420

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain d

30S ribosomal protein S4