HL_7RYG_080

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GCAGCC(7MG)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 7MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYG_080 not in the Motif Atlas

Homologous match to HL_4LFB_013

Geometric discrepancy: 0.1583

The information below is about HL_4LFB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7RYG|1|a|G|518
7RYG|1|a|C|519
7RYG|1|a|A|520
7RYG|1|a|G|521
7RYG|1|a|C|522
7RYG|1|a|C|523
7RYG|1|a|7MG|524
7RYG|1|a|C|525

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S12