HL_7RYG_094

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GUGACAAAC

Length

9 nucleotides

Bulged bases

7RYG|1|a|C|1165

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYG_094 not in the Motif Atlas

Geometric match to HL_7A0S_056

Geometric discrepancy: 0.2953

The information below is about HL_7A0S_056

Detailed Annotation

GNRA with extra cWW

Broad Annotation

GNRA with extra cWW

Motif group

HL_87268.3

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7RYG|1|a|G|1161
7RYG|1|a|U|1162
7RYG|1|a|G|1163
7RYG|1|a|A|1164
7RYG|1|a|C|1165
7RYG|1|a|A|1166
7RYG|1|a|A|1167
7RYG|1|a|A|1168
7RYG|1|a|C|1169

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain b

30S ribosomal protein S2