HL_7RYH_016

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

CUUCGUG

Length

7 nucleotides

Bulged bases

7RYH|1|A|U|544, 7RYH|1|A|U|547

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYH_016 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.2794

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7RYH|1|A|C|542
7RYH|1|A|U|543
7RYH|1|A|U|544
7RYH|1|A|C|545
7RYH|1|A|G|546
7RYH|1|A|U|547
7RYH|1|A|G|548

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain I

50S ribosomal protein L13

Chain Q

50S ribosomal protein L21