3D structure

PDB id
7RYH (explore in PDB, NAKB, or RNA 3D Hub)
Description
A. baumannii Ribosome-TP-6076 complex: Empty 70S
Experimental method
ELECTRON MICROSCOPY
Resolution
2.43 Å

Loop

Sequence
G(PSU)GCUAACGU
Length
10 nucleotides
Bulged bases
7RYH|1|A|U|955, 7RYH|1|A|C|958
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7RYH_026 not in the Motif Atlas
Homologous match to HL_5J7L_159
Geometric discrepancy: 0.0864
The information below is about HL_5J7L_159
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7RYH|1|A|G|951
7RYH|1|A|PSU|952
7RYH|1|A|G|953
7RYH|1|A|C|954
7RYH|1|A|U|955
7RYH|1|A|A|956
7RYH|1|A|A|957
7RYH|1|A|C|958
7RYH|1|A|G|959
7RYH|1|A|U|960

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L16

Coloring options:


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