HL_7RYH_033

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

7RYH|1|A|U|1391, 7RYH|1|A|U|1392

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYH_033 not in the Motif Atlas

Homologous match to HL_5J7L_168

Geometric discrepancy: 0.1241

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7RYH|1|A|G|1384
7RYH|1|A|U|1385
7RYH|1|A|U|1386
7RYH|1|A|A|1387
7RYH|1|A|A|1388
7RYH|1|A|U|1389
7RYH|1|A|A|1390
7RYH|1|A|U|1391
7RYH|1|A|U|1392
7RYH|1|A|C|1393

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain S

50S ribosomal protein L23