HL_7RYH_038

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

7RYH|1|A|A|1612, 7RYH|1|A|A|1614, 7RYH|1|A|A|1616

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYH_038 not in the Motif Atlas

Homologous match to HL_7RQB_040

Geometric discrepancy: 0.0872

The information below is about HL_7RQB_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

7RYH|1|A|C|1610
7RYH|1|A|G|1611
7RYH|1|A|A|1612
7RYH|1|A|C|1613
7RYH|1|A|A|1614
7RYH|1|A|C|1615
7RYH|1|A|A|1616
7RYH|1|A|G|1617

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain R

50S ribosomal protein L22