HL_7RYH_080

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

GCAGCC(7MG)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 7MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYH_080 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.2174

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

7RYH|1|a|G|518
7RYH|1|a|C|519
7RYH|1|a|A|520
7RYH|1|a|G|521
7RYH|1|a|C|522
7RYH|1|a|C|523
7RYH|1|a|7MG|524
7RYH|1|a|C|525

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S12