HL_7S1G_015

3D structure

PDB id

7S1G (explore in PDB, NAKB, or RNA 3D Hub)

Description

wild-type Escherichia coli stalled ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7S1G|1|C|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S1G_015 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.142

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7S1G|1|C|G|462
7S1G|1|C|U|463
7S1G|1|C|U|464
7S1G|1|C|A|465
7S1G|1|C|A|466
7S1G|1|C|U|467
7S1G|1|C|A|468
7S1G|1|C|C|469
7S1G|1|C|C|470

Current chains

Chain C

16S rRNA

Nearby chains