HL_7S1G_041

3D structure

PDB id

7S1G (explore in PDB, NAKB, or RNA 3D Hub)

Description

wild-type Escherichia coli stalled ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7S1G|1|I|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S1G_041 not in the Motif Atlas

Geometric match to HL_4WF9_006

Geometric discrepancy: 0.063

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7S1G|1|I|G|194
7S1G|1|I|A|195
7S1G|1|I|A|196
7S1G|1|I|A|197
7S1G|1|I|C|198
7S1G|1|I|A|199
7S1G|1|I|U|200
7S1G|1|I|C|201

Current chains

Chain I

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L15

Chain f

50S ribosomal protein L28