HL_7S1G_045

3D structure

PDB id

7S1G (explore in PDB, NAKB, or RNA 3D Hub)

Description

wild-type Escherichia coli stalled ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GAUAC

Length

5 nucleotides

Bulged bases

7S1G|1|I|U|321, 7S1G|1|I|A|322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S1G_045 not in the Motif Atlas

Homologous match to HL_5J7L_143

Geometric discrepancy: 0.0972

The information below is about HL_5J7L_143

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

7S1G|1|I|G|319
7S1G|1|I|A|320
7S1G|1|I|U|321
7S1G|1|I|A|322
7S1G|1|I|C|323

Current chains

Chain I

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L4

Chain c

50S ribosomal protein L24