3D structure

PDB id
7S1G (explore in PDB, NAKB, or RNA 3D Hub)
Description
wild-type Escherichia coli stalled ribosome with antibiotic linezolid
Experimental method
ELECTRON MICROSCOPY
Resolution
2.48 Å

Loop

Sequence
GUCGGACAU
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7S1G_110 not in the Motif Atlas
Homologous match to HL_9DFE_198
Geometric discrepancy: 0.1577
The information below is about HL_9DFE_198
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_02452.1
Basepair signature
cWW-F-cWH-F-F-F-F
Number of instances in this motif group
8

Unit IDs

7S1G|1|I|G|2304
7S1G|1|I|U|2305
7S1G|1|I|C|2306
7S1G|1|I|G|2307
7S1G|1|I|G|2308
7S1G|1|I|A|2309
7S1G|1|I|C|2310
7S1G|1|I|A|2311
7S1G|1|I|U|2312

Current chains

Chain I
23S rRNA

Nearby chains

Chain N
50S ribosomal protein L5

Coloring options:


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