HL_7S1I_065

3D structure

PDB id

7S1I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli stalled ribosome with antibiotic radezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

7S1I|1|I|U|1174, 7S1I|1|I|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S1I_065 not in the Motif Atlas

Geometric match to HL_2ZNI_001

Geometric discrepancy: 0.3089

The information below is about HL_2ZNI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

7S1I|1|I|C|1172
7S1I|1|I|U|1173
7S1I|1|I|U|1174
7S1I|1|I|A|1175
7S1I|1|I|U|1176
7S1I|1|I|G|1177

Current chains

Chain I

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L15