HL_7S1K_023
3D structure
- PDB id
- 7S1K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- CGCAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7S1K_023 not in the Motif Atlas
- Homologous match to HL_4LFB_020
- Geometric discrepancy: 0.059
- The information below is about HL_4LFB_020
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 335
Unit IDs
7S1K|1|C|C|897
7S1K|1|C|G|898
7S1K|1|C|C|899
7S1K|1|C|A|900
7S1K|1|C|A|901
7S1K|1|C|G|902
Current chains
- Chain C
- 16S rRNA
Nearby chains
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: