3D structure

PDB id
7S1K (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid
Experimental method
ELECTRON MICROSCOPY
Resolution
2.42 Å

Loop

Sequence
CUUAGAAGCAG
Length
11 nucleotides
Bulged bases
7S1K|1|I|A|1070
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7S1K_063 not in the Motif Atlas
Homologous match to HL_5J7L_161
Geometric discrepancy: 0.2651
The information below is about HL_5J7L_161
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_19210.3
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
7

Unit IDs

7S1K|1|I|C|1064
7S1K|1|I|U|1065
7S1K|1|I|U|1066
7S1K|1|I|A|1067
7S1K|1|I|G|1068
7S1K|1|I|A|1069
7S1K|1|I|A|1070
7S1K|1|I|G|1071
7S1K|1|I|C|1072
7S1K|1|I|A|1073
7S1K|1|I|G|1074

Current chains

Chain I
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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