3D structure

PDB id
7S1K (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid
Experimental method
ELECTRON MICROSCOPY
Resolution
2.42 Å

Loop

Sequence
CGACAC(6MZ)G
Length
8 nucleotides
Bulged bases
7S1K|1|I|A|1614, 7S1K|1|I|A|1616
QA status
Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7S1K_075 not in the Motif Atlas
Homologous match to HL_5J7L_173
Geometric discrepancy: 0.067
The information below is about HL_5J7L_173
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_89567.2
Basepair signature
cWW-F-F-F
Number of instances in this motif group
8

Unit IDs

7S1K|1|I|C|1612
7S1K|1|I|G|1613
7S1K|1|I|A|1614
7S1K|1|I|C|1615
7S1K|1|I|A|1616
7S1K|1|I|C|1617
7S1K|1|I|6MZ|1618
7S1K|1|I|G|1619

Current chains

Chain I
23S rRNA

Nearby chains

Chain a
50S ribosomal protein L22
Chain k
50S ribosomal protein L34

Coloring options:


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