HL_7S9U_003

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

7S9U|1|A|A|124

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S9U_003 not in the Motif Atlas

Homologous match to HL_4WF9_003

Geometric discrepancy: 0.1122

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

7S9U|1|A|G|122
7S9U|1|A|G|123
7S9U|1|A|A|124
7S9U|1|A|A|125
7S9U|1|A|A|126
7S9U|1|A|C|127

Current chains

Chain A

RNA (2436-MER)

Nearby chains

Chain T

50S ribosomal protein L23

Chain d

50S ribosomal protein L34