HL_7S9U_004

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGUAAUGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S9U_004 not in the Motif Atlas

Homologous match to HL_4WF9_004

Geometric discrepancy: 0.2278

The information below is about HL_4WF9_004

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.1

Basepair signature

cWW-F

Number of instances in this motif group

10

Unit IDs

7S9U|1|A|C|136
7S9U|1|A|G|137
7S9U|1|A|U|138
7S9U|1|A|A|139
7S9U|1|A|A|140
7S9U|1|A|U|141
7S9U|1|A|G|142
7S9U|1|A|G|143

Current chains

Chain A

RNA (2436-MER)

Nearby chains

Chain T

50S ribosomal protein L23