HL_7S9U_011

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAUAG

Length

5 nucleotides

Bulged bases

7S9U|1|A|U|365, 7S9U|1|A|A|366

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S9U_011 not in the Motif Atlas

Homologous match to HL_5J7L_143

Geometric discrepancy: 0.0731

The information below is about HL_5J7L_143

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

7S9U|1|A|C|363
7S9U|1|A|A|364
7S9U|1|A|U|365
7S9U|1|A|A|366
7S9U|1|A|G|367

Current chains

Chain A

RNA (2436-MER)

Nearby chains

Chain E

50S ribosomal protein L4