HL_7S9U_027

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAUAAGA

Length

8 nucleotides

Bulged bases

7S9U|1|A|U|1004, 7S9U|1|A|G|1007

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S9U_027 not in the Motif Atlas

Homologous match to HL_7A0S_026

Geometric discrepancy: 0.3557

The information below is about HL_7A0S_026

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

7S9U|1|A|U|1001
7S9U|1|A|G|1002
7S9U|1|A|A|1003
7S9U|1|A|U|1004
7S9U|1|A|A|1005
7S9U|1|A|A|1006
7S9U|1|A|G|1007
7S9U|1|A|A|1008

Current chains

Chain A

RNA (2436-MER)

Nearby chains