HL_7S9U_029

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUGAC

Length

6 nucleotides

Bulged bases

7S9U|1|A|U|1087, 7S9U|1|A|G|1160

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S9U_029 not in the Motif Atlas

Geometric match to HL_361D_002

Geometric discrepancy: 0.3353

The information below is about HL_361D_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

7S9U|1|A|G|1085
7S9U|1|A|U|1086
7S9U|1|A|U|1087
7S9U|1|A|G|1160
7S9U|1|A|A|1161
7S9U|1|A|C|1162

Current chains

Chain A

RNA (2436-MER)

Nearby chains