HL_7S9U_039

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAAG

Length

4 nucleotides

Bulged bases

7S9U|1|A|A|1614

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S9U_039 not in the Motif Atlas

Homologous match to HL_7A0S_039

Geometric discrepancy: 0.1475

The information below is about HL_7A0S_039

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

7S9U|1|A|C|1613
7S9U|1|A|A|1614
7S9U|1|A|A|1615
7S9U|1|A|G|1616

Current chains

Chain A

RNA (2436-MER)

Nearby chains

Chain C

50S ribosomal protein L2