HL_7S9U_057

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGCAUGGAAG

Length

10 nucleotides

Bulged bases

7S9U|1|A|C|2435

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S9U_057 not in the Motif Atlas

Homologous match to HL_4WF9_055

Geometric discrepancy: 0.2451

The information below is about HL_4WF9_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51853.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

7S9U|1|A|C|2433
7S9U|1|A|G|2434
7S9U|1|A|C|2435
7S9U|1|A|A|2436
7S9U|1|A|U|2437
7S9U|1|A|G|2438
7S9U|1|A|G|2439
7S9U|1|A|A|2440
7S9U|1|A|A|2441
7S9U|1|A|G|2442

Current chains

Chain A

RNA (2436-MER)

Nearby chains

Chain L

50S ribosomal protein L15