HL_7S9U_062

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AAAGAUGAU

Length

9 nucleotides

Bulged bases

7S9U|1|A|A|2845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S9U_062 not in the Motif Atlas

Homologous match to HL_5J7L_201

Geometric discrepancy: 0.1125

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7S9U|1|A|A|2844
7S9U|1|A|A|2845
7S9U|1|A|A|2846
7S9U|1|A|G|2847
7S9U|1|A|A|2848
7S9U|1|A|U|2849
7S9U|1|A|G|2850
7S9U|1|A|A|2851
7S9U|1|A|U|2852

Current chains

Chain A

RNA (2436-MER)

Nearby chains

Chain D

50S ribosomal protein L3

Chain N

50S ribosomal protein L17