HL_7SA4_048

3D structure

PDB id

7SA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Damaged 70S ribosome with PrfH bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

G(PSU)AAC(3TD)A(PSU)AAC

Length

11 nucleotides

Bulged bases

7SA4|1|1|A|1913, 7SA4|1|1|C|1914, 7SA4|1|1|A|1916

QA status

Modified nucleotides: PSU, 3TD

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SA4|1|1|G|1910
7SA4|1|1|PSU|1911
7SA4|1|1|A|1912
7SA4|1|1|A|1913
7SA4|1|1|C|1914
7SA4|1|1|3TD|1915
7SA4|1|1|A|1916
7SA4|1|1|PSU|1917
7SA4|1|1|A|1918
7SA4|1|1|A|1919
7SA4|1|1|C|1920

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain 5

Transfer RNA; tRNA

Chain 8

Peptide chain release factor H