HL_7SA4_082

3D structure

PDB id

7SA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Damaged 70S ribosome with PrfH bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

GCAGCC(G7M)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SA4_082 not in the Motif Atlas

Homologous match to HL_4LFB_013

Geometric discrepancy: 0.1248

The information below is about HL_4LFB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SA4|1|2|G|521
7SA4|1|2|C|522
7SA4|1|2|A|523
7SA4|1|2|G|524
7SA4|1|2|C|525
7SA4|1|2|C|526
7SA4|1|2|G7M|527
7SA4|1|2|C|528

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 7

mRNA

Chain 8

Peptide chain release factor H

Chain q

30S ribosomal protein S12