HL_7SA4_107
3D structure
- PDB id
- 7SA4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Damaged 70S ribosome with PrfH bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.55 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SA4_107 not in the Motif Atlas
- Geometric match to HL_5J7L_012
- Geometric discrepancy: 0.2905
- The information below is about HL_5J7L_012
- Detailed Annotation
- GNRA wlth extra near cWW
- Broad Annotation
- GNRA wlth extra near cWW
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
7SA4|1|6|G|32
7SA4|1|6|C|33
7SA4|1|6|U|34
7SA4|1|6|C|35
7SA4|1|6|A|36
7SA4|1|6|U|37
7SA4|1|6|A|38
7SA4|1|6|A|39
7SA4|1|6|C|40
Current chains
- Chain 6
- P-tRNA, E-tRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 5
- Transfer RNA; tRNA
- Chain 7
- mRNA
- Chain l
- 30S ribosomal protein S7
- Chain p
- 30S ribosomal protein S11
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