HL_7SA4_108
3D structure
- PDB id
- 7SA4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Damaged 70S ribosome with PrfH bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.55 Å
Loop
- Sequence
- GUUCAAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SA4_108 not in the Motif Atlas
- Geometric match to HL_1N78_003
- Geometric discrepancy: 0.1839
- The information below is about HL_1N78_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.2
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
7SA4|1|6|G|54
7SA4|1|6|U|55
7SA4|1|6|U|56
7SA4|1|6|C|57
7SA4|1|6|A|58
7SA4|1|6|A|59
7SA4|1|6|A|60
7SA4|1|6|U|61
7SA4|1|6|C|62
Current chains
- Chain 6
- P-tRNA, E-tRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: