HL_7SAE_023

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGUUGAAAAG

Length

10 nucleotides

Bulged bases

7SAE|1|A|U|794, 7SAE|1|A|A|798

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SAE_023 not in the Motif Atlas

Homologous match to HL_7A0S_022

Geometric discrepancy: 0.1569

The information below is about HL_7A0S_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50204.1

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

11

Unit IDs

7SAE|1|A|C|791
7SAE|1|A|G|792
7SAE|1|A|U|793
7SAE|1|A|U|794
7SAE|1|A|G|795
7SAE|1|A|A|796
7SAE|1|A|A|797
7SAE|1|A|A|798
7SAE|1|A|A|799
7SAE|1|A|G|800

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain S

50S ribosomal protein L22

Chain b

50S ribosomal protein L32

Chain d

50S ribosomal protein L34