HL_7SAE_053

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGUAAAGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SAE_053 not in the Motif Atlas

Homologous match to HL_4WF9_052

Geometric discrepancy: 0.2379

The information below is about HL_4WF9_052

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_93324.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

24

Unit IDs

7SAE|1|A|U|2353
7SAE|1|A|G|2354
7SAE|1|A|U|2355
7SAE|1|A|A|2356
7SAE|1|A|A|2357
7SAE|1|A|A|2358
7SAE|1|A|G|2359
7SAE|1|A|G|2360

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain V

50S ribosomal protein L27