HL_7SAE_054

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUACAAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SAE_054 not in the Motif Atlas

Homologous match to HL_4WF9_053

Geometric discrepancy: 0.1414

The information below is about HL_4WF9_053

Detailed Annotation

GNRA with extra cWW

Broad Annotation

GNRA with extra cWW

Motif group

HL_04259.3

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7SAE|1|A|C|2384
7SAE|1|A|C|2385
7SAE|1|A|U|2386
7SAE|1|A|A|2387
7SAE|1|A|C|2388
7SAE|1|A|A|2389
7SAE|1|A|A|2390
7SAE|1|A|G|2391

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain L

50S ribosomal protein L15

Chain V

50S ribosomal protein L27