HL_7SAE_061

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AAAGAUGAU

Length

9 nucleotides

Bulged bases

7SAE|1|A|A|2845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SAE_061 not in the Motif Atlas

Homologous match to HL_5J7L_201

Geometric discrepancy: 0.1053

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7SAE|1|A|A|2844
7SAE|1|A|A|2845
7SAE|1|A|A|2846
7SAE|1|A|G|2847
7SAE|1|A|A|2848
7SAE|1|A|U|2849
7SAE|1|A|G|2850
7SAE|1|A|A|2851
7SAE|1|A|U|2852

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain D

50S ribosomal protein L3

Chain N

50S ribosomal protein L17