HL_7SAE_066

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCUGAAAGCAUCUAAGC

Length

17 nucleotides

Bulged bases

7SAE|1|A|G|2780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SAE_066 not in the Motif Atlas

Homologous match to HL_7A0S_074

Geometric discrepancy: 0.3443

The information below is about HL_7A0S_074

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_28904.1

Basepair signature

cWW-F-F-tWH-cWH-tSH-tHW-F-F-F-F-F

Number of instances in this motif group

1

Unit IDs

7SAE|1|A|G|2773
7SAE|1|A|C|2774
7SAE|1|A|U|2775
7SAE|1|A|G|2776
7SAE|1|A|A|2777
7SAE|1|A|A|2778
7SAE|1|A|A|2779
7SAE|1|A|G|2780
7SAE|1|A|C|2781
7SAE|1|A|A|2782
7SAE|1|A|U|2783
7SAE|1|A|C|2784
7SAE|1|A|U|2785
7SAE|1|A|A|2786
7SAE|1|A|A|2787
7SAE|1|A|G|2788
7SAE|1|A|C|2789

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain J

50S ribosomal protein L13