HL_7SFR_005

3D structure

PDB id

7SFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmethylated Mtb Ribosome 50S with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7SFR|1|A|A|198

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SFR_005 not in the Motif Atlas

Geometric match to HL_4WF9_006

Geometric discrepancy: 0.085

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_02262.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

36

Unit IDs

7SFR|1|A|G|196
7SFR|1|A|A|197
7SFR|1|A|A|198
7SFR|1|A|A|199
7SFR|1|A|C|200
7SFR|1|A|A|201
7SFR|1|A|U|202
7SFR|1|A|C|203

Current chains

Chain A

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15

Chain X

50S ribosomal protein L28