HL_7SFR_006

3D structure

PDB id

7SFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmethylated Mtb Ribosome 50S with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CAAUUG

Length

6 nucleotides

Bulged bases

7SFR|1|A|U|230

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SFR_006 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.2857

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.10

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7SFR|1|A|C|227
7SFR|1|A|A|228
7SFR|1|A|A|229
7SFR|1|A|U|230
7SFR|1|A|U|231
7SFR|1|A|G|232

Current chains

Chain A

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15