HL_7SFR_029

3D structure

PDB id

7SFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmethylated Mtb Ribosome 50S with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GAAACAGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SFR_029 not in the Motif Atlas

Geometric match to HL_4WF9_028

Geometric discrepancy: 0.0986

The information below is about HL_4WF9_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47171.3

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7SFR|1|A|G|1107
7SFR|1|A|A|1108
7SFR|1|A|A|1109
7SFR|1|A|A|1110
7SFR|1|A|C|1111
7SFR|1|A|A|1112
7SFR|1|A|G|1113
7SFR|1|A|C|1114

Current chains

Chain A

23S rRNA

Nearby chains

Chain v

peptide