HL_7SFR_037

3D structure

PDB id

7SFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmethylated Mtb Ribosome 50S with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

7SFR|1|A|U|1527, 7SFR|1|A|U|1528

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SFR_037 not in the Motif Atlas

Geometric match to HL_7RQB_036

Geometric discrepancy: 0.0826

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7SFR|1|A|G|1520
7SFR|1|A|U|1521
7SFR|1|A|U|1522
7SFR|1|A|G|1523
7SFR|1|A|A|1524
7SFR|1|A|U|1525
7SFR|1|A|A|1526
7SFR|1|A|U|1527
7SFR|1|A|U|1528
7SFR|1|A|C|1529

Current chains

Chain A

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23