HL_7SFR_065

3D structure

PDB id

7SFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmethylated Mtb Ribosome 50S with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CU(OMG)UUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SFR_065 not in the Motif Atlas

Geometric match to HL_7A0S_061

Geometric discrepancy: 0.134

The information below is about HL_7A0S_061

Detailed Annotation

LSU A loop

Broad Annotation

LSU A loop

Motif group

HL_02262.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

36

Unit IDs

7SFR|1|A|C|2789
7SFR|1|A|U|2790
7SFR|1|A|OMG|2791
7SFR|1|A|U|2792
7SFR|1|A|U|2793
7SFR|1|A|C|2794
7SFR|1|A|G|2795

Current chains

Chain A

23S rRNA

Nearby chains