HL_7SFR_087

3D structure

PDB id

7SFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmethylated Mtb Ribosome 50S with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GCAGCC(G7M)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SFR_087 not in the Motif Atlas

Geometric match to HL_4WF9_053

Geometric discrepancy: 0.3461

The information below is about HL_4WF9_053

Detailed Annotation

GNRA with extra cWW

Broad Annotation

GNRA with extra cWW

Motif group

HL_87268.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7SFR|1|a|G|512
7SFR|1|a|C|513
7SFR|1|a|A|514
7SFR|1|a|G|515
7SFR|1|a|C|516
7SFR|1|a|C|517
7SFR|1|a|G7M|518
7SFR|1|a|C|519

Current chains

Chain a

16S rRNA

Nearby chains

Chain l

30S ribosomal protein S12