HL_7SFR_112

3D structure

PDB id

7SFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmethylated Mtb Ribosome 50S with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

UUUGUGUAGGAUAGGUGGGAGACUGUGAAACCUCGACGCCAGUUGGGGCGGAGUCGUUGUUGAAAUACCACUCUGA

Length

76 nucleotides

Bulged bases

7SFR|1|A|U|2346, 7SFR|1|A|G|2347, 7SFR|1|A|U|2348, 7SFR|1|A|A|2351, 7SFR|1|A|G|2352, 7SFR|1|A|G|2353, 7SFR|1|A|U|2355, 7SFR|1|A|G|2360, 7SFR|1|A|U|2369, 7SFR|1|A|C|2383, 7SFR|1|A|U|2403, 7SFR|1|A|A|2408, 7SFR|1|A|A|2410, 7SFR|1|A|C|2414

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SFR|1|A|U|2344
7SFR|1|A|U|2345
7SFR|1|A|U|2346
7SFR|1|A|G|2347
7SFR|1|A|U|2348
7SFR|1|A|G|2349
7SFR|1|A|U|2350
7SFR|1|A|A|2351
7SFR|1|A|G|2352
7SFR|1|A|G|2353
7SFR|1|A|A|2354
7SFR|1|A|U|2355
7SFR|1|A|A|2356
7SFR|1|A|G|2357
7SFR|1|A|G|2358
7SFR|1|A|U|2359
7SFR|1|A|G|2360
7SFR|1|A|G|2361
7SFR|1|A|G|2362
7SFR|1|A|A|2363
7SFR|1|A|G|2364
7SFR|1|A|A|2365
7SFR|1|A|C|2366
7SFR|1|A|U|2367
7SFR|1|A|G|2368
7SFR|1|A|U|2369
7SFR|1|A|G|2370
7SFR|1|A|A|2371
7SFR|1|A|A|2372
7SFR|1|A|A|2373
7SFR|1|A|C|2374
7SFR|1|A|C|2375
7SFR|1|A|U|2376
7SFR|1|A|C|2377
7SFR|1|A|G|2378
7SFR|1|A|A|2379
7SFR|1|A|C|2380
7SFR|1|A|G|2381
7SFR|1|A|C|2382
7SFR|1|A|C|2383
7SFR|1|A|A|2384
7SFR|1|A|G|2385
7SFR|1|A|U|2386
7SFR|1|A|U|2387
7SFR|1|A|G|2388
7SFR|1|A|G|2389
7SFR|1|A|G|2390
7SFR|1|A|G|2391
7SFR|1|A|C|2392
7SFR|1|A|G|2393
7SFR|1|A|G|2394
7SFR|1|A|A|2395
7SFR|1|A|G|2396
7SFR|1|A|U|2397
7SFR|1|A|C|2398
7SFR|1|A|G|2399
7SFR|1|A|U|2400
7SFR|1|A|U|2401
7SFR|1|A|G|2402
7SFR|1|A|U|2403
7SFR|1|A|U|2404
7SFR|1|A|G|2405
7SFR|1|A|A|2406
7SFR|1|A|A|2407
7SFR|1|A|A|2408
7SFR|1|A|U|2409
7SFR|1|A|A|2410
7SFR|1|A|C|2411
7SFR|1|A|C|2412
7SFR|1|A|A|2413
7SFR|1|A|C|2414
7SFR|1|A|U|2415
7SFR|1|A|C|2416
7SFR|1|A|U|2417
7SFR|1|A|G|2418
7SFR|1|A|A|2419

Current chains

Chain A

23S rRNA

Nearby chains

Chain k

30S ribosomal protein S11