HL_7SS9_042

3D structure

PDB id

7SS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G partially dissociated (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

7SS9|1|1|U|1729, 7SS9|1|1|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SS9_042 not in the Motif Atlas

Homologous match to HL_7A0S_043

Geometric discrepancy: 0.4841

The information below is about HL_7A0S_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SS9|1|1|C|1727
7SS9|1|1|C|1728
7SS9|1|1|U|1729
7SS9|1|1|C|1730
7SS9|1|1|G|1731
7SS9|1|1|C|1732
7SS9|1|1|G|1733

Current chains

Chain 1

23S rRNA

Nearby chains