HL_7SS9_100

3D structure

PDB id

7SS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G partially dissociated (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7SS9|1|3|U|1451, 7SS9|1|3|C|1452

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SS9_100 not in the Motif Atlas

Geometric match to HL_5J7L_143

Geometric discrepancy: 0.2675

The information below is about HL_5J7L_143

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

7SS9|1|3|C|1449
7SS9|1|3|U|1450
7SS9|1|3|U|1451
7SS9|1|3|C|1452
7SS9|1|3|G|1453
7SS9|1|3|G|1454

Current chains

Chain 3

16S rRNA

Nearby chains