HL_7SS9_110

3D structure

PDB id

7SS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G partially dissociated (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGACACGUGGUAUCC

Length

15 nucleotides

Bulged bases

7SS9|1|1|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SS9|1|1|G|380
7SS9|1|1|G|381
7SS9|1|1|A|382
7SS9|1|1|C|383
7SS9|1|1|A|384
7SS9|1|1|C|385
7SS9|1|1|G|386
7SS9|1|1|U|387
7SS9|1|1|G|388
7SS9|1|1|G|389
7SS9|1|1|U|390
7SS9|1|1|A|391
7SS9|1|1|U|392
7SS9|1|1|C|393
7SS9|1|1|C|394

Current chains

Chain 1

23S rRNA

Nearby chains

Chain 6

Transfer RNA; tRNA

Chain x

50S ribosomal protein L28