3D structure

PDB id
7SS9 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Late translocation intermediate with EF-G partially dissociated (Structure V)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
GGAGUACGGCCGCAAGGUUAAAAC
Length
24 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7SS9|1|3|G|887
7SS9|1|3|G|888
7SS9|1|3|A|889
7SS9|1|3|G|890
7SS9|1|3|U|891
7SS9|1|3|A|892
7SS9|1|3|C|893
7SS9|1|3|G|894
7SS9|1|3|G|895
7SS9|1|3|C|896
7SS9|1|3|C|897
7SS9|1|3|G|898
7SS9|1|3|C|899
7SS9|1|3|A|900
7SS9|1|3|A|901
7SS9|1|3|G|902
7SS9|1|3|G|903
7SS9|1|3|U|904
7SS9|1|3|U|905
7SS9|1|3|A|906
7SS9|1|3|A|907
7SS9|1|3|A|908
7SS9|1|3|A|909
7SS9|1|3|C|910

Current chains

Chain 3
16S rRNA

Nearby chains

Chain 1
Large subunit ribosomal RNA; LSU rRNA
Chain Q
30S ribosomal protein S12

Coloring options:

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