HL_7SSD_027

3D structure

PDB id

7SSD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mid translocation intermediate with EF-G bound with GDP (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

7SSD|1|1|U|1066, 7SSD|1|1|A|1067, 7SSD|1|1|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSD|1|1|C|1064
7SSD|1|1|U|1065
7SSD|1|1|U|1066
7SSD|1|1|A|1067
7SSD|1|1|G|1068
7SSD|1|1|A|1069
7SSD|1|1|A|1070
7SSD|1|1|G|1071
7SSD|1|1|C|1072
7SSD|1|1|A|1073
7SSD|1|1|G|1074

Current chains

Chain 1

23S rRNA

Nearby chains

Chain 8

Elongation factor G

Chain i

50S ribosomal protein L11

Chain m

50S ribosomal protein L16