HL_7SSD_094
3D structure
- PDB id
- 7SSD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mid translocation intermediate with EF-G bound with GDP (Structure IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUUAAGUC
- Length
- 8 nucleotides
- Bulged bases
- 7SSD|1|3|G|1094
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SSD_094 not in the Motif Atlas
- Geometric match to HL_1P6V_001
- Geometric discrepancy: 0.2775
- The information below is about HL_1P6V_001
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_53890.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
7SSD|1|3|G|1089
7SSD|1|3|U|1090
7SSD|1|3|U|1091
7SSD|1|3|A|1092
7SSD|1|3|A|1093
7SSD|1|3|G|1094
7SSD|1|3|U|1095
7SSD|1|3|C|1096
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 4
- mRNA
- Chain G
- 30S ribosomal protein S2
- Chain L
- 30S ribosomal protein S7
- Chain Z
- 30S ribosomal protein S21
Coloring options: