HL_7SSL_011

3D structure

PDB id

7SSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GACACGUGGUAUC

Length

13 nucleotides

Bulged bases

7SSL|1|1|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSL|1|1|G|381
7SSL|1|1|A|382
7SSL|1|1|C|383
7SSL|1|1|A|384
7SSL|1|1|C|385
7SSL|1|1|G|386
7SSL|1|1|U|387
7SSL|1|1|G|388
7SSL|1|1|G|389
7SSL|1|1|U|390
7SSL|1|1|A|391
7SSL|1|1|U|392
7SSL|1|1|C|393

Current chains

Chain 1

23S rRNA

Nearby chains

Chain 6

Transfer RNA; tRNA

Chain x

50S ribosomal protein L28